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Agilent
GeneSpring™ GX 10. Microarray Data Analysis Software |
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 GeneSpring is a powerful visualization
and analysis software designed for use with expression
data generated from micorarray, SAGE and RT-PCR
technologies. GeneSpring provides sophisticated
clustering methods to uncover patterns of gene expression
data and the relationships between these patterns.
In addition, genes and their expression patterns
can be visually characterized based on their location
within a cellular pathway using Pathway Viwer. With
the GeneSpring-R Integration Package user will be
able to use the power of R and BioConductor scripts
in GeneSpring's rich graphical environment. .[More Info] |
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Agilent DNA Analytics 4.0 |
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 DNA Analytics 4.0 provides an intuitive user interface for visually exploring, detecting, and analyzing CGH, ChIP, and Methylation data in context with the genome of interest. With this latest release, DNA Analytics addresses the needs of faster processing power with robust 32-bit and 64-bit versions. [More Info] |
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Ariadne Genomics Pathway Studio® 6.0 - NEW! |
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 Pathway Studio® pathway analysis software enables researchers to interpret microarray and proteomics data in the context of pathways, gene regulation networks and protein interaction maps. Pathway Studio® comes with proprietary ResNet database of 1,250,000+ functional relationships automatically extracted from scientific literature, and works with leading databases of signaling and biochemical pathways, including KEGG, BIND, GO, PathArt, STKE Connections Maps and Prolexys HyNet. The latest version of Pathway Studio 6.0 includes advanced analysis algorithm like GSEA and NEA (subnetwork enrichment analysis) [More Info] |
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Ariadne Genomics MedScan™ Text- to-Knowledge Suite |
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 MedScan™ is Natural Language Processing - based technology for automated extraction of biological facts from scientific literature, MEDLINE abstracts, and your internal text documents. MedScan utilizes a high content linguistics approach to extract functional relationships between proteins, cell processes and small molecules. It recognizes types of regulatory mechanisms involved, the effects of regulation, and can be customized to extract other types of information. [More Info] |
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CLC Genomics Workbench 3.5 - Now with ChIP-Seq Tools |
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 CLC Genomics Workbench 3.5 is the latest solution for analyzing and visualizing Next Generation Sequencing data. It incorporates cutting-edge technology and algorithms, including a SIMD-accelerated assembly algorithm, while also supporting and integrating with the rest of your typical NGS workflow. The latest version of Genomics Workbench includes tools for ChIp-Seq, digital gene expression analysis, improvement on RNA-seq and enhancement on SNP & DIP detection [More Info] |
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CLCbio Main Workbench 5.0 - NEW! |
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CLC Main Workbench aggregates all features of CLC Protein Workbench, CLC RNA Workbench, and CLC DNA Workbench in one integrated software package. CLC Main Workbench creates a software environment enabling users to make a large number of advanced protein, DNA, and RNA sequence analyses, combined with smooth data management, and excellent graphical viewing and output options. The latest version of Main Workbench comes with functonalities for digital gene expression analysis [More Info] |
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CLCbio NGS CELL - NEW! |
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 CLC NGS Cell is a high-performance computing solution for reference assembling of Next Generation Sequencing data. The command-line interface of CLC NGS Cell enables the functionalities to be easily included in scripts and other Next Generation Sequencing work-flows. CLC NGS Cell is utilizing SIMD instructions to parallelize and accelerate the assembly algorithms, making the program the fastest Next Generation Sequencing assembler at present. [More Info] |
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CLCbio Bioinformatics Cell |
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 CLC Bioinformatics Cell uses Single Instruction, Multiple Data (SIMD) technique to parallelize and thereby accelerate bioinformatics algorithms on Intel and AMD processor powered computer or computer cluster. CLC Cell optimised for Smith Waterman search and ClusterW alignment are currently available . [More Info] |
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CLCbio Bioinformatics Cube |
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 CLC Bioinformatics Cube is a FPGA based hardware device used for high performance database search and sequence alignment, such as Smith Waterman and ClusterW. Smith Waterman calculation can be accelerated 125X than a standard 3Ghz computer. CLC Cube hooks up with computer via USB connection and can be operated using CLC Workbench softwares or command lines [More Info] |
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CLCbio Gene Workbench |
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 CLC Gene Workbench is a bioinformatics software package containing a range of specialized DNA analyses and bioinformatics tools for molecular biology. When using CLC Gene Workbench, researchers will be able to perform most daily bioinformatics work, including data management and reporting, in one single integrated and user-friendly software package. [More Info] |
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CLCbio Protein Workbench |
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 CLC Protein Workbench is a bioinformatic software package that enables users to make a large number of advanced protein sequence analyses, combined with smooth data management, and excellent graphical viewing and output options. [More Info] |
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Silicon Genetics
Varia™ Genetic Variation Analysis Software |
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 Varia is a desktop analysis
workbench for analyzing high-volume, high-density
genomic variation data. Designed for the biologist
and the statistician alike, Varia is capable of
importing, visualizing, and analyzing hundreds of
thousands of variation measurements simultaneously,
for rapid localization of disease or phenotype markers. [More Info] |
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